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Thomas Brunold

Website | Awards | Publications

Professor, Born 1969

Diploma 1993, University of Bern, Switzerland

Ph.D. 1996, University of Bern, Switzerland

Room: 6211a
Phone: 608-265-9056
Email: brunold@chem.wisc.edu
Position: Professor

Selected Publications

  • Conrad, K. S.; Brunold, T. C. “Spectroscopic and Computational Studies of Glutathionylcobalamin: Nature of Co–S Bonding and Comparison to Co–C bonding in Coenzyme B12”, Inorg. Chem. 2011, 70, 6313–6324.

  • Gardner, J. D.; Pierce, B. S.; Fox. B. G.; Brunold, T. C. “Spectroscopic and Computational Characterization of Substrate-Bound Mouse Cysteine Dioxygenase: Nature of the Ferrous and Ferric Cysteine Adducts and Mechanistic Implications”, Biochemistry 2010, 49, 6033-6041.

  • Van Heuvelen, K. M.; Cho, J.; Dingee, T.; Riordan, C. G.; Brunold, T. C. “Spectroscopic and Computational Studies of a Series of High-Spin Ni(II) Thiolate Complexes”, Inorg. Chem. 2010, 69, 6535-6544.

     

  • Van Heuvelen, K. M.; Cho, J.; Riordan, C. G.; Brunold, T. C. “Spectroscopic and Computational Studies of a m-h2:h2-Disulfido-Bridged Dinickel(II) Species, [{(PhTttBu)Ni}2(m-h2:h2-S2)]: Comparison of Side-on Disulfido and Peroxo Bonding in (Ni2+)2 and (Cu2+)2 Species”, Inorg. Chem. 2010, 49, 3113-3120.

  • Van Heuvelen, K. M.; Kieber-Emmons, M. T.; Riordan, C. G.; Brunold, T. C. “Spectroscopic and Computational Studies of a Trans-μ-1,2-Disulfido-Bridged Dinickel Species, [{(tmc)Ni}2(S2)](OTf)2: Comparison of End-on Disulfido and Peroxo Bonding in (Ni2+)2 and (Cu2+)2 Species”, Inorg. Chem. 2010, 49, 3104-3112.

     

  • Liptak, M. D.; Van Heuvelen, K. M.; Brunold, T. C. "Computational Studies of Bioorganometallic Enzymes and Cofactors", in Sigel, A.; Sigel; H.; Sigel, R. K. O., Eds.; "Metal Ions in Life Sciences", The Royal Society of Chemistry, Cambridge, UK, 2009, 6, 417-460 (invited article).

  • Liptak, M. D.; Fleischhacker, A. S.; Matthews, R. G.; Telser, J.; Brunold, T. C. “Spectroscopic and Computational Characterization of the Base-off Forms of Cob(II)alamin”, J. Phys. Chem. B 2009, 113, 5245-5254.

  • Brunold, T. C.; Conrad, K.; Liptak, M. D.; Park, K. "Spectroscopically Validated Density Functional Theory Studies of the B12 Cofactors and their Interactions with Enzyme Active Sites", Coord. Chem. Rev. 2009, 253, 779-794 (invited article).

  • Liptak, M. D.; Datta, S.; Matthews, R.; Brunold, T. C. “Spectroscopic Study of the Cobalamin-Dependent Methionine Synthase in the Activation Conformation: Effects of the Y1139 Residue and S-Adenosylmethionine on the B12 Cofactor”, J. Am. Chem. Soc. 2008, 130, 16374-16381.

  • Grove, L. E.; Brunold, T. C. “Second-Sphere Tuning of the Metal Ion Reduction Potentials in Iron and Manganese Superoxide Dismutases”, Comments on Inorganic Chemistry, 2008, 29, 134-168 (invited article).

  • Park, K.; Mera, P.; Escalante-Semerena, J. C.; Brunold, T. C. "Kinetic and Spectroscopic Studies of the ATP:Corrinoid Adenosyltransferase PduO from Lactobacillus reuteri:  Insights into Substrate Specificity and Mechanism of Co(II)corrinoid Reduction", Biochemistry 2008, 47, 9007-9015.

  • Grove, L. E.; Hallman, J. K.; Emerson, J. P.; Halfen, J. A.; Brunold, T. C. “Synthesis, X-ray Crystallographic Characterization, and Electronic Structure Studies of a Di-Azide Iron(III) Complex: Implications for the Azide Adducts of Iron(III) Superoxide Dismutase”, Inorg. Chem. 2008, 47, 5762-5774.

  • Grove, L. E.; Xie, J.; Yikilmaz, E.; Karapetyan, A.; Miller, A.-F.; Brunold, T. C. "Spectroscopic and Computational Insights into Second Sphere Amino Acid Tuning of Substrate Analogue/Active Site Interactions in Iron(III) Superoxide Dismutase", Inorg. Chem. 2008, 47, 3993-4004.

  • Grove, L. E.; Xie, J.; Yikilmaz, E.; Miller, A.-F; Brunold, T. C. “Spectroscopic and Computational Insights into Second-Sphere Contributions to Redox Tuning in Escherichia coli Iron Superoxide Dismutase”, Inorg. Chem. 2008, 47, 3978-3992.

  • Liptak, M.D.; Fleishchacker, A.S.; Matthews, R.; Brunold, T.C. “Probing the Role of the Histidine 759 Ligand in Cobalamin-Dependent Methionine Synthase”, Biochemistry 2007, 46, 8024-8035.

  • Liptak, M. D.; Van Heuvelen, K. M.; Brunold, T. C. "Computational Studies of Bioorganometallic Enzymes and Cofactors", in Sigel, A.; Sigel; H.; Sigel, R. K. O., Eds.; "Metal Ions in Life Sciences", The Royal Society of Chemistry, Cambridge, UK, 2009, 6, 417-460 (invited article).

Research Description


The research carried out in my laboratory is aimed at elucidating the geometric and electronic properties, and thus the reactivity, of metal centers in proteins and cofactors through combined spectroscopic and computational studies of key enzymatic states and synthetic inorganic model complexes. The spectroscopic techniques used in this research include electronic absorption, circular dichroism, magnetic circular dichroism, resonance Raman, and electron paramagnetic resonance. These experimental techniques are complemented by density functional theory and combined quantum mechanics/molecular mechanics electronic structure calculations to develop experimentally validated bonding descriptions. With this combined spectroscopic/computational approach we can selectively probe the geometric and electronic properties of catalytically active metal centers in proteins and model complexes and also explore the natures of catalytic intermediates that are inaccessible to structural studies using X-ray crystallography.

One area of research in my laboratory is devoted to the study of the known bio-organometallic cofactors, which include the enzymatically active forms of vitamin B12, adenosylcobalamin and methylcobalamin, and the Ni-containing F430 species. While structurally related to the well-characterized hemes, these cofactors employ macrocyclic ligands (termed corrin and hydrocorphin, respectively) that are substantially more reduced than the porphyrin ring, offering them considerably more conformational freedom. The mechanistic significance of this increased flexibility in the catalytic cycles of B12- and NiF430-dependent enzymes remains a subject of intense debate.

A second project pursued in my laboratory aims at exploring the geometric and electronic prerequisites for the high catalytic activities of Ni-, Fe- and Mn-dependent superoxide dismutases (SODs) that protect aerobic organisms from oxidative damage mediated by the superoxide radical anion. The Ni-dependent enzyme has only recently been isolated from some Streptomyces species, and X-ray crystallographic data have revealed that NiSOD is structurally unrelated to the other SODs. Conversely, the Fe- and MnSODs from E. coli possess virtually identical protein folds and active-site geometries; however, they are strictly metal specific. Though small differences in the second coordination spheres (comprising amino acid residues that are not directly bound to the active-site metal ion) do exist between these two enzymes, their relationship to this extraordinary metal-ion specificity remains incompletely understood.

A third major research focus of my laboratory is directed toward elucidating the electronic properties and catalytic mechanisms of enzymes possessing polynuclear NiFeS active-site clusters, including ACS and CODH that catalyze the reversible oxidation of CO to CO2 and the synthesis of acetyl-CoA from CO, CoA, and a methyl group, respectively. While high-resolution X-ray structures have recently been solved for CODH and bifunctional ACS/CODH enzymes, fundamental questions concerning the redox states, substrate binding sites, and the natures of catalytically relevant reaction intermediates of these highly elaborate polynuclear active sites have yet to be answered.

Last updated: January 20, 2009.

 

Awards

  • 2012 Vilas Associate Award

  • 2011 Division of University Housing's Honored Instructors Award

  • 2010 Division of University Housing's Honored Instructors Award

  • 2009 Division of University Housing’s Honored Instructors Award

  • 2009 Graduate Student Faculty Liaison Committee Mentor Award

  • 2009 Romnes Award, University of Wisconsin-Madison

  • 2003 Swiss Chemical Society: Alfred Werner Award

  • 2003 Sloan Foundation Fellow

  • 2003 NSF-CAREER Award

  • 2000 Research Corporation Innovation Award

  • 2000 University of Bern, Switzerland: Theodor Kocher Award

  • 1997 University of Bern, Switzerland: Faculty Award for Ph.D. Thesis